京都大学 物質－細胞統合システム拠点

Sugiyama Laboratory, Kyoto University

Publications :2019

2019 (Highlighted Articles Representing International Collaboration Project)

427. Folding of Single-stranded Circular DNA into Rigid Rectanglar DNA Accelerates its Cellular Uptake
Otsuki, S.; Shiba, Y.; Maezawa, T.; Hidaka, K; Sugiyama, H.; Endo, M.; Takahashi, Y.; Takakura, Y.; Nishikawa, M.
Nanoscale 2019, 11, 23416-23422.

426. G-quadruplex as a Versatile Scaffold for Catalysis
Yum, J. H.; Park, S.; Sugiyama, H.
Org. Biomol. Chem. 2019, 17, 9547-9561.

425. Effects of Physical Damage in the Intermediate Phase on the Progression of Amyloid ß Fibrillation
Tashiro, R.; Taguchi, H.; Hidaka, K.; Endo, M.; Sugiyama, H.
Chem. Asian J. 2019, 14, 4140-4145.

424. Switching Off Cancer-Causing Telomerase Using Small Molecules
Asamitsu, S.; Shioda, N.; Sugiyama, H.
Cell Chemical Biology 2019, 26, 1045-1047.

423. Control of Forward/Reverse Orientation Preference of Cyclic Pyrrole-Imidazole Polyamides
Hirose, Y.; Asamitsu, S.; Bando, T.; Sugiyama, H.
J. Am. Chem. Soc. 2019, 141, 13165-13170.

422. Highly Sensitive and Selective Mercury Sensor based on Mismatched Base Pairing with dioxT
Han, J. H.; Hirashima, S.; Park, S.; Sugiyama, H.
Chem. Comm. 2019, 55, 10245-10248.

421. Translation-dependent Unwinding of Stem-loops by UPF1 Licenses Regnase-1 to Degrade Inflammatory mRNAs
Mino, T.; Iwai, N.; Endo, M.; Inoue, K.; Akaki, K.; Hia, F.; Uehata, T.; Emura, T.; Hidaka, K.; Suzuki, Y.; Standley, D.M.; Okada-Hatakeyama, M.; Ohno, S.; Sugiyama, H.; Yamashita, A.; Takeuchi, O.
Nucleic Acids Research 2019, 47, 8838-8859.

420. Direct Observation of the Formation and Dissociation of Double-Stranded DNA Containing G-Quadruplex/i-Motif Sequences in the DNA Origami Frame Using High-Speed AFM
Endo, M.; Xing, X.; Sugiyama, H.
Danzhou Yang and Clement Lin (eds.), G-Quadruplex Nucleic Acids: Methods and Protocols, Methods in Molecular Biology,
Vol. 2035, page 299-322.

419. New Size-expanded Fluorescent Thymine Analogue: Synthesis, Characterization, and Application
Hirashima, S.; Han, J.; Tsuno, H.; Tanigaki, Y.; Park, S.; Sugiyama, H.
Chem. Eur. J. 2019, 25, 9913-9919.

418. Orientation Preferences of Hairpin Pyrrole-Imidazole Polyamides toward mCGG Site
Sato, S.; Asamitsu, S.; Bando, T.; Sugiyama, H.
Bioorg. Med. Chem. 2019, 27, 2167-2171.

417. Oligomerization of a Modular Ribozyme Assembly of which is Controlled by a Programmable RNA-RNA Interface between Two Structural Modules
Tsuruga, R.; Uehara, N.; Suzuki, Y.; Furuta, H.; Sugiyama, H.; Endo, M.; Matsumura, S.; Ikawa, Y.
J. Biosci. & Bioeng. 2019, 128, 410-415.

416. Direct Observation and Analysis of the Dynamics of the Photoresponsive Transcription Factor GAL4
Raghavan, G.; Hidaka, K.; Sugiyama, H.; Endo, M.
Angew. Chem. 2019, 58, 7626-7630.

415. A Photocaged DNA Nanocapsule for Controlled Unlocking and Opening inside the Cell
Tohgasaki, T.; Shitomi, Y. Feng, Y.; Honna, S.; Emura, T.; Hidaka, K.; Sugiyama, H.; Endo, M.
Bioconjugate Chem. 2019, 30, 1860-1863.

414. Submolecular Dissection Reveals Strong and Specific Binding of Polyamide-Pyridostatin Conjugates to Human Telomere Interface
Mandal, S.; Kawamoto, Y.; Yue, Z.; Hashiya, K.; Cui Y.; Bando, T.; Sugiyama, H.; Mao, H.
Nucleic Acids Res. 2019, 47, 3295-3305.

413. Modular DNA-based Hybrid Catalysts as a Toolbox for Enantioselective Hydration of α,β-Unsaturated Ketones
Yum, J. H.; Park, S.; Hiraga, R.; Okamura, I.; Notsu, S.; Sugiyama, H.
Org. Biomol. Chem. 2019, 17, 2548-2553.

412. Therapeutic Gene Regulation Using Pyrrole-Imidazole Polyamides
Yu, Z.; Pandian, G. N.; Hidaka, T.; Sugiyama, H.
Adv. Drug Deliv. Rev. 2019, 147, 66-85.

411. Recent Progress of Specific G-quadruplex-Preferred Ligands Toward Cancer Therapy
Asamitsu, S.; Obata, S.; Yu, Z.; Bando, T.; Sugiyama, H.
Molecules 2019, 24, 429.

410. Molecular Characteristics of DNA-Alkylating PI Polyamides Targeting RUNX Transcription Factors
Maeda, R.; Sato, S.; Ohno, T.; Kashiwazaki, G.; Obata, S.; Hashiya, K.; Bando, T.; Sugiyama, H.
J. Am. Chem. Soc. 2019, 141, 4257-4263.

409. Chemical and Photobiological Study of the Structures and Functions of DNA
Sugiyama, H.
Photomedicine and Photobiology 2019, 40, 1-6.

408. Direct Observation of the Double‐Stranded DNA Formation through Metal Ion‐Mediated Base Pairing in the Nanoscale Structure
Xing, X.; Feng, Y.; Yu, Z.; Hidaka, K.; Liu F.; Ono, A.; Sugiyama, H.; Endo, M.
Chem. E. J. 2019, 25, 1446-1450.

407. Electron Injection from Mitochondrial Transcription Factor A to DNA Associated with Thymine Dimer Photo Repair
Hashiya, F.; Ito, S.; Sugiyama, H.
Bioorg. Med. Chem. 2019, 27, 278-284.

406. Binding of a Telomestatin Derivative Changes Mechanical Anisotropy of Human Telomeric G-quadruplex
Jonchhe, S.; Chimire, C.; Cui, Y.; Park, S.; Iida, K.; Nagasawa, K.; Sugiyama, H.; Mao, H.
Angew. Chem. Int. Ed. 2019, 58, 877-881.

405. Nanochannel-confined TAMRA-polypyrrole Stained DNA Stretching by Varying the Ionic Strength from Micromolar to Millimolar Concentrations
Jo, K.; Lee, S.; Lee, Y.; Kim, Y.; Wang, C.; Park, J.; Jung, G. Y.; Chen, Y. L.; Chang, R.; Ikeda, S.; Sugiyama, H.
Polymers 2019, 11, 15.

404. Ligand Design to Acquire Specificity to Intended G-quadruplex Structure
Asamitsu, S.; Bando, T.; Sugiyama, H.
Chem. Eur. J. 2019, 25, 417-430.